Ongoing Projects and Publications

Ongoing Projects and Publications

Publications

1. Ahmmed, S., Khan, M.A.A.K., Eshik, M.M.E., Punom, N.J., Islam, A.B.M.M.K. and Rahman, M.S., 2019. Genomic and evolutionary features of two AHPND positive Vibrio parahaemolyticus strains isolated from shrimp (Penaeus monodon) of south-west Bangladesh. BMC microbiology, 19(1), pp.1-14.

2. Eshik, M.M.E., Punom, N.J., Begum, M.K., Khan, T., Saha, M.L. and Rahman, M.S., 2018. Molecular characterization of acute Hepatopancreatic necrosis disease causing Vibrio Parahaemolyticus Strains in cultured shrimp Penaeus Monodon in South-west farming region of Bangladesh. Dhaka University Journal of Biological Sciences, 27(1), pp.57-68.

3. Hossain, M.M., Punom, N.J., Eshik, MME., Begum, M.K., Bhuiyan, MAI. and Rahman, MS., Histopathology and molecular characterization of microsporidian parasites in cultured shrimp Penaeus monodon Fabricius 1798 of Bangladesh.

4. Mst. Aziza Begum, Nusrat Jahan Punom, Md MostaviEnanEshik, Mst. Khadiza Begum, Tahsin Khan, Mihir Lal Saha, Mohammad Shamsur Rahman. 2019. Proximate composition, fatty acid and amino acid profile of striped catfish, Pangasianodon hypophthalmus (Sauvage, 1878) cultured in Bangladesh. Bioresearch communications. 5(2): 715- 724

5. Mst. Aziza Begum, Nusrat Jahan Punom, Md MostaviEnanEshik, Mst. Khadiza Begum, Tahsin Khan, Mihir Lal Saha, Mohammad Shamsur Rahman. 2020. Pathogenic gut microbiota associated with stripped catfish, Pangasianodon hypophthalmus cultured in Bangladesh and their antibiotic sensitivity pattern. Dhaka Univ. J. Biol. Sci. 29(1): 61-73.

6. Qadeer A, Liu M, Yang J, Liu X, Khalil SK, Huang Y, Habibullah-Al-Mamun M, Gao D, Yang Y. 2019. Trophodynamics and parabolic behaviors of polycyclic aromatic hydrocarbons in an urbanized lake food web, Shanghai. Ecotoxicology and Environmental Safety, 178, 17–24. DOI: https://doi.org/10.1016/j.ecoenv.2019.04.003.

7. Habibullah-Al-Mamun M, Ahmed MK, Masunaga S. 2018. Polycyclic aromatic hydrocarbons (PAHs) in surface water from the coastal area of Bangladesh. Advances in Environmental Research, 7(3), 177-200. DOI: https://doi.org/10.12989/aer.2018.7.3.177.

8. Habibullah-Al-Mamun M, Ahmed MK, Islam MS, Hossain A, Tokumura M, Masunaga S. 2019. Polychlorinated biphenyls (PCBs) in commonly consumed seafood from the coastal area of Bangladesh: occurrence, distribution and human health implications. Environmental Science and Pollution Research, 26, 1355–1369. DOI: https://doi.org/10.1007/s11356-018-3671-x.

9. Habibullah-Al-Mamun M, Ahmed MK, Islam MS, Tokumura M, Masunaga S. 2019. Occurrence, distribution and possible sources of polychlorinated biphenyls (PCBs) in the surface water from the Bay of Bengal coast of Bangladesh. Ecotoxicology and Environmental Safety, 167, 450–458. DOI: https://doi.org/10.1016/j.ecoenv.2018.10.052.

10. Habibullah-Al-Mamun M, Ahmed MK, Islam MS, Tokumura M, Masunaga S. 2019. Distribution of polycyclic aromatic hydrocarbons (PAHs) in commonly consumed seafood from coastal areas of Bangladesh and associated human health implications. Environmental Geochemistry and Health, 41, 1105–1121. DOI: https://doi.org/10.1007/s10653-018-0202-0.

11. Habibullah-Al-Mamun M, Ahmed MK, Islam MS, Tokumura M, Masunaga S. 2019. Seasonal-spatial distributions, congener profile, and risk assessment of polychlorinated biphenyls (PCBs) in the surficial sediments from the coastal area of Bangladesh. Soil and Sediment Contamination: An International Journal, 28(1), 28–50. DOI: https://doi.org/10.1080/15320383.2018.1528575.

12. Habibullah-Al-Mamun M, Ahmed MK, Hossain A, Masunaga S. 2019. Distribution, source apportionment and risk assessment of polycyclic aromatic hydrocarbons (PAHs) in the surficial sediments from the coastal areas of Bangladesh. Archives of Environmental Contamination and Toxicology, 76, 178–190.  DOI: https://doi.org/10.1007/s00244-018-0571-5.

13. Hossain A, Nakamichi S, Habibullah-Al-Mamun M, Tani K, Masunaga S, Matsuda H. 2018. Occurrence and ecological risk of pharmaceuticals in river surface water of Bangladesh. Environmental Research, 165, 258–266.

14. Begum, MA, NJ Punom, MME Eshik, MK Begum, T Khan, ML Saha and M.S. Rahman. 2020. Pathogenic gut microbiota associated with striped catfish, Pangasianodon hypophthalmus (sauvage, 1878) cultured in Bangladesh and their antibiotic sensitivity pattern. Dhaka University Journal of Biological Sciences 29(1): 61-73. 

15. Ahmed, S, MAAK Khan, MME Eshik, ABMMK Islam and M.S. Rahman. 2019. Genomic and evolutionary features of two AHPND positive Vibrio parahaemolyticus strains isolated from shrimp (Penaeus monodon) of south-west Bangladesh. Published in the Journal of ‘BMC Microbiology’ 19:270; https://doi.org/10.1186/s12866-019-1655-8

16. Hossain, MM, NJ Punom, MME Eshik, MK Begum, MAI Bhuiyan and M.S. Rahman. 2019. Histopathology and molecular characterization of microsporidian parasites in cultured shrimp Penaeus monodon of Bangladesh. Journal of the Asiatic society of Bangladesh (Science) 45 (2): 227-236

17. Hasan, M, MI Haque, N Akter, MS Rahman and AS Eti. 2019. Effects of wetting media cattle blood, rice gruel and water on the yield and amino acid composition of tubificid worms. Journal of the Asiatic society of Bangladesh (Science) 45 (2): 249-259

18. Begum, MA, NJ Punom, MME Eshik, MK Begum, ML Saha and M.S. Rahman. 2019. Proximate composition, fatty acid and amino acid profile of striped catfish, Pangasianodon hypophthalmus (Sauvage, 1878) cultured in Bangladesh. Bioresearch Communications. 5 (2): 715-724

19. Rana, S, Faruque MH, Eshik MME, Hasan MR, MS Rahman. 2019. Seasonal variations in nutritional profile of the freshwater mud eel, Monopterus cuchia (Hamilton, 1822). Journal of Fisheries 7(1): 671-680. DOI: 10.17017/jfish.v7i1.2019.327

20. Begum, MK, MME Eshik, NJ Punom, MM Abedin and M.S. Rahman. 2018. Growth performances and bacterial load of Heteropneustes fossilis (Bloch, 1794) using cinnamon as feed supplement. Bangladesh J. Zool. 46 (2): 155-166

21. Eshik, MME, NJ Punom, MK Begum, T Khan, ML Saha and M.S. Rahman. 2018. Molecular characterization of Acute Hepatopancreatic necrosis disease (AHPND) causing Vibrio parahaemolyticus strains in cultured shrimp Penaeus monodon in south-west farming region of Bangladesh. Dhaka University journal of Biological Sciences 27(1): 57-68

22. Md Munjur Hossain, Nusrat Jahan Punom, Md Mostavi Enan Eshik, Mst Khadiza Begum, Md Aminul Islam Bhuyian and Mohammad Shamsur Rahman : Histopathology and molecular characterization of microsporidian parasites in cultured shrimp Penaeus monodon of Bangladesh, Journal of the Asiatic Society of Bangladesh, Science , vol.45 , no.2 , pp.227-236 , 2019 .

23. Shawon Ahmmed, Md Abdullah-Al-Kamran Khan, Md Mostavi Enan Eshik, Nusrat Jahan Punom, ABMM Khademul Islam and Mohammad Shamsur Rahman : Genomic and evolutionary features of two AHPND positive Vibrio parahaemolyticus strains isolated from shrimp (Penaeus monodon) of south-west Bangladesh, BMC Microbiology, vol.19 , no.270 , 2019 .

24. Sohel Rana, Md Hasan Faruque, Md Mostavi Enan Eshik, Md Rakibul Hasan and Mohammad Shamsur Rahman : Seasonal variations in nutritional profile of the freshwater mud eel, Monopterus cuchia (Hamilton, 1822), Journal of Fisheries , vol.7 , no.1 , pp.671-680 , 2019 .

25. Mst Aziza Begum, Nusrat Jahan Punom, Md Mostavi Enan Eshik, Mst Khadiza Begum, Mihir Lal Saha and Mohammad Shamsur Rahman : Proximate composition, fatty acid and amino acid profile of striped catfish, Pangasianodon hypophthalmus (Sauvage, 1878) cultured in Bangladesh, Bioresearch Communications , vol.5 , no.2 , pp.715-724 , 2019 .

26. Md Mostavi Enan Eshik, Nusrat Jahan Punom, Mst Khadiza Begum, Tahsin Khan, Mihir Lal Saha and Mohammad Shamsur Rahman : Molecular characterization of Acute Hepatopancreatic necrosis disease (AHPND) causing Vibrio parahaemolyticus strains in cultured shrimp Penaeus monodon in south-west farming region of Bangladesh, Dhaka University journal of Biological Sciences , vol.27 , no.1 , pp.57-68 , 2018 .

27. Mst Khadiza Begum, Md Mostavi Enan Eshik, Nusrat Jahan Punom, Md Minhazul Abedin and Mohammad Shamsur Rahman : Growth performances and bacterial load of Heteropneustes fossilis (Bloch, 1794) using cinnamon as feed supplement, Bangladesh Journal of Zoology , vol.46 , no.2 , pp.155-166 , 20

28. Md Mostavi Enan Eshik, Md Minhazul Abedin, Nusrat Jahan Punom, Mst Khadiza Begum and Mohammad Shamsur Rahman : Molecular identification of AHPND positive Vibrio parahaemolyticus causing an outbreak in south-west shrimp farming regions of Bangladesh, Journal of Bangladesh Academy of Sciences , vol.41 , no.2 , pp.127-135 , 2017 .

29. Mst Aziza Begum, Nusrat Jahan Punom, Md Mostavi Enan Eshik, Mst Khadiza Begum, Tahsin Khan, Mihir Lal Saha and Mohammad Shamsur Rahman. Pathogenic gut microbiota associated stripped catfish, Pagasianodon hypophthalmus cultured in Bangladesh and their antibiotic sensitivity pattern, Dhaka University journal of Biological Sciences, vol. 29 , no.1 , pp.61-73 , 2020 .

30. Fatema et al. (2018). Water quality assessment of the river Buriganga, Bangladesh. Journal of Biodiversity Conservation and Bio-resource Management 4(1):47-54.

31. Fatema, K., Sakib, M. N., Al Zahid, M., Sultana, N. and Hassan, M. R. (2019). Growth performances and bioaccumulation of heavy metals in Anabas testudineus (bloch, 1792) cultured using different market feeds. Bangladesh J. Zool. 47(1): 77-88.

32. Faruque, M. H., Bhuiyan, R., Fatema, K. and Hasan, M. R. (2019). Comparative  evaluation of the nutritional quality of male versus female freshwater Mud Eel, Monopterus cuchia. Bioresearch Communications 5 (1): 627-636.

33. Salma Akter., Fu, L., Jung, Y., Conte, M. Lo, Lawson, J. R., Lowther, W. T., Sun, R., Liu, K., Yang, J., and Carroll, K. S. (2018) Chemical proteomics reveals new targets of cysteine sulfinic acid reductase. Nat. Chem. Biol. 14, 995–1004, Impact factor: 5-year Impact Factor: 13.942

34. Methyl arachidonyl fluorophosphonate inhibits mycobacterium tuberculosis thioesterase tesa and globally affects vancomycin susceptibility. Fontaine V. Yang D, Vandenbussche G, Vertommen D, Evrard D, Abskharon R, Cavalier JF, Berger G, Canaan S, Khan MS, Zeng S, Wohlkönig A, Prévost M, Soumillion P, Publication date 2019, Impact factor: 2.99

35. Current status and barriers to fisheries comanagement: Evidences from an Oxbow lake of Bangladesh, MSK Md. Monirul Islam, Chandan Kar, Goutam Kumar Kundu, Gouri Mondal, Bangladesh J. Zool. 46(2): ,2018. 46 (2), 105-116

36. Flow mode enantioselective transamination using transaminase enzymes immobilized in a macroporous silica monolith, L van den Biggelaar, A Gauchet, MS Khan, P Soumillion, DP Debecker, International Symposium on Green Chemistry 2019

37. Immobilizing transaminase in a macroporous silica monolith for flow mode enantioselective transamination. DP Debecker, L van den Biggelaar, A Gauchet, MS Khan, P Soumillion, International Symposium on Relations between Homogeneous and Heterogeneous Catalysis (ISHHC18).

38. Kundu, G. K., Islam, M. M., Hasan, M. F., Saha, S., Mondal, G., Paul, B., & Mustafa, M. G. (2019). Patterns of fish community composition and biodiversity in riverine fish sanctuaries in Bangladesh: Implications for hilsa shad conservation. Ecology of Freshwater Fish. 

39. Paul, B., Hasan, M. F., Islam, M.M., Kundu, G., Mondal, G., Saha, S.,  & Mustafa, M. G.(2018). Evaluation of the status of threatened catfish 
    Bagarius bagarius (Hamilton, 1822) from the Padma and Meghna river stretches of Bangladesh. The Dhaka University Journal of Biological  Science, Vol.28, page: 111-119 

40. Mondal, G., Saha, S., Islam, M.M., Kundu, G., Paul, B., Hasan, M. F., & Mustafa, M. G.(2018). Reassessment of the threatened status of IUCN red listed Indian river shad Gudusia chapra (Hamilton, 1822) from Bangladesh. The Dhaka University Journal of Biological Science,28(1), 83-91 

41. Islam, M. M., Kar, C., Kundu, G., Mondal, G., & Khan, M. S. (2018). Current status and barriers to fisheries comanagement: Evidences from an Oxbow lake of Bangladesh. Bangladesh Journal of Zoology, 46(2), 105-116. 

Projects

1. Longitudinal variation of WSSV in cultured shrimp

2. Profiling of innate immune gene expression in fish healthy and diseased tilapia

3. Improvement of growth performance, disease resistance and gut microbiota by applying probiotics in fish 

4. Isolation and characterization of Streptococcus agalactiae from diseased tilapia

5. Classical and molecular epidemiology of white spot syndrome virus in cultured shrimp of south-west region of Bangladesh. 

6. Hilsa Fish (Tenualosa ilisha) Migration: Understanding molecular Mechanism of Osmoregulation and Stress Regulation

7. Uptake of arsenic and other toxic elements by rice from contaminated agricultural ecosystems: Effect of rice genotypes, irrigation, and contamination level

8. Uptake of arsenic and other toxic elements by rice from contaminated agricultural ecosystems: Effect of rice genotypes, irrigation, and contamination level

9. Monitoring of micro-plastic concentration in surface water and sediment in Cox’s Bazar sea beach area and ecological risk assessment. 

10. Influence of trophic guilds and habitat preferences on trace metal accumulation in freshwater fishes: implications for habitat restoration and fisheries management.

11. Comparative assessment of organochlorine pesticides (OCPs) residues in farmed and wild fish in Bangladesh and implications for human health. 

12. Fisheries Biodiversity of Hatiya Island, Noakhali 

13. Microplastic and Pharmaceuticals monitoring at Asia and Australia. Collaborative research with Japan and Australia.

14. Antibiotics, antibiotic resistant bacteria and resistance genes in fish and shrimp aquaculture of Bangladesh

15. Impacts of Environmental Risk Factors on the Outbreak of White Spot Syndrome Virus in Shrimp Aquaculture of Bangladesh

16. Acute Effects of Tetracycline Exposure in the Fingerlings of Rui, Labeo rohita

17. Stress effect of textile effluent on fish metabolic enzymes.

18. Antioxidant response in fish under oxidative stress imparted by textile effluent.

19. Enzymatic marker for the measurement of the effects of  multistressor textile effluent on Fish of Bangladesh

20. Deciphering putative hatching enzyme in Tenualosa ilisha

21. Impact of Conservation Actions on Fish Biodiversity and Revision of Conservation Strategy in the Context of Climate Change and Blue Economy

22. Molecular characterization and antibiotic susceptibility of the causative agents of vibriosis diseases in cultured shrimp Penaeus monodon of Bangladesh

23. Taxonomic and genetic diversity of shrimp and prawn species of Bangladesh using DNA barcoding

24. Bacterial and heavy metal contamination in Shrimp PL nurseries of south-west farming regions of Bangladesh

25. Immediate and accurate diagnosis of emerging Tilapia Lake Virus (TiLV) disease in Bangladesh through molecular approach

26. Molecular Characterization of Pathogenic Gut Microbiota of Public Health Concern isolated from Farmed and Marketed Striped Catfish Pangasianodon hypophthalmus (Sauvage, 1878)